RNA-seq workflow with RAPL energy measurement Workflow uri icon

purpose

  • RNA-seq analysis using FastQC, Salmon transcriptome indexing and quantification, and MultiQC, combined with RAPL CPU-package and DRAM energy measurement during execution. The workflow implementation is nextflow-io/rnaseq-nf. The energy collection method is adapted from CRC-FONDA/RAPL_measurement_workflows by Philipp Thamm and Ulf Leser. Each linked run records its own input dataset, source adaptation, resource limits, traces, and measured results. This combination does not reproduce the original RAPL paper experiment.

workflow engine