Small RNA-seq workflow with RAPL energy measurement · run 2026-09-21 15:52:44–15:53:31 CEST
Workflow Run
where the run's resources went
One bar per workflow stage, longest CPU time first. Hover a row for its values; click a stage to open its page.
this run among the workflow's runs
Overview
stages of the workflow
run by
- Yagmur Kati Non-Faculty Academic
start time
- September 21, 2026 3:52 PM
end time
- September 21, 2026 3:53 PM
duration (s)
- 47
duration time calculation method
- Wall-clock interval surrounding the successful Nextflow run command, including orchestration. Precise duration: 47.12435 seconds. Published timestamps use Europe/Berlin, CEST (UTC+02:00).
run status
- Succeeded
Performance
CPU time (s)
- 8.231308
CPU time calculation method
- Sum of task realtime multiplied by CPU percentage from the four Nextflow .command.trace records. Nextflow trace/v2 stores realtime in milliseconds and CPU percentage in tenths of a percent; CPU seconds = realtime_ms * raw_cpu / 1,000,000. Includes only the four scientific task processes; excludes the driver and counter reader.
task count
- 4
pod count
- 4
peak memory (GB)
- 0.192524288
GPU usage status
- CPU-only workflow run; no GPU was requested or used.
memory calculation method
- Largest observed task peak RSS from the four Nextflow task traces; tasks ran sequentially. RSS bytes divided by 1,000,000,000 for GB. This is a sampled task-memory peak, excludes the driver, and does not measure time-averaged memory.
Energy And Carbon
energy consumed (kWh)
- 0.000622351110238249
energy metric source
- Intel RAPL powercap energy_uj counters; package-0 and dram domains
energy calculation method
- Whole-node CPU-package energy during the 47.124350-second workflow command interval: 2240.463997 J, converted to kWh by division by 3,600,000. The separately recorded DRAM domain measured 289.840600 J and is not included in this kWh field. Counter samples were collected approximately once per second; microjoule deltas were corrected for wrapping and linearly interpolated at execution boundaries. These whole-node readings include other activity, the driver, and monitoring overhead; they are not exclusive workflow energy. No idle baseline was subtracted.
carbon calculation method
- Not calculated: no verified carbon-intensity factor was collected for this execution.
Workflow Stages
workflow stages of the run
Reproducibility
code commit
git commit
- 5c89d3859abbe54893d4e1ae0f21115dcebd9d1d
input data
job name
- rapl_rnaseq_20260921
container image
- docker.io/library/python@sha256:a36c24f9cbdf4fd0f52d67f0823eeac19c2028c637cecc392d97f980d4fec56b
- docker.io/nextflow/nextflow@sha256:485a3cdf1ce4781266147c005e56847f06f326fe4f128afc8cdd8b735c3f58e2
- docker.io/nextflow/rnaseq-nf@sha256:1f451ff552c6b779709a71f4b21cfffacb3661380d7241c8489a169c3476a448
code version
- sha256:3a8834338908a55aba99bb2d4f39f047347d5389970fd4e4e02112b0aab15e1b
trace types
- CPU-package and DRAM RAPL counter readings with timestamps; Nextflow task traces, execution report, timeline and logs; Kubernetes Job/Pod records and container logs; executed task commands and exit codes; output validation and SHA-256 checksums
trace data format
- Plain text, TSV, JSON, HTML, and shell scripts
Execution Environment
workflow engine
- Nextflow Workflow Engine
execution host
- hu-worker-c34
compute cluster
- FONDA Cluster Compute Cluster
backend
- Kubernetes Backend