Long-term vegetation dynamics in the Mediterranean (nf-core) · run 2026-10-20 22:09–22:11 CEST Workflow Run uri icon

start time

  • October 20, 2026 10:09 PM

end time

  • October 20, 2026 10:11 PM

duration (s)

  • 64

duration time calculation method

  • Slurm ElapsedRaw of the job (start to end). Display timestamps use Europe/Berlin.

run status

  • Succeeded

CPU efficiency (%)

  • 8.6

data read (GB)

  • 18.07254290432

data written (GB)

  • 21.33324726272

CPU time (s)

  • 1404.202

CPU time calculation method

  • Slurm TotalCPU of the job (user + system CPU time of all steps); 256 CPUs allocated of 256 node CPUs.

task count

  • 280

peak memory (GB)

  • 3.006316544

GPU usage status

  • GPU requested in Slurm allocation

memory calculation method

  • Peak memory: the largest resident memory (Slurm MaxRSS) of any job step, converted from bytes to gigabytes. No average memory: Slurm does not record memory use over time.

energy consumed (kWh)

  • 0.009983031775085029

energy measurement coverage

  • 100% of the node (whole node, measured)

Slurm accounting energy (kWh)

  • 0.0088

node power average (W)

  • 561.5

node power maximum (W)

  • 801.0

node idle power (W)

  • 427.0

node awake idle power (W)

  • 448.2

energy above idle (kWh)

  • 0.002391920663973918

carbon emission (kg CO2e)

  • 0.004472398235238093

carbon intensity (kg CO2e/kWh)

  • 0.448

energy metric source

  • IPMI power of the compute node read through its Prometheus ipmi_exporter; Slurm acct_gather_energy/ipmi for comparison

energy calculation method

  • Node energy: IPMI power of the node (ipmi_exporter) read about every 1.0 s while the job ran (63 readings, 442 to 801 W, covering 96% of the job), integrated over time and scaled to the job duration (64 s): 35939 J. The whole node was allocated to this job, so all of it is the job's energy, converted to kilowatt-hours (1 kWh = 3,600,000 J): 0.009983 kWh. For comparison, Slurm accounting (acct_gather_energy/ipmi) reports 31680 J; it reads the power only every 30 sec, which is less precise for a job of this length. Single node hpc-cms01-024 (HPC@HU), allocated entirely to this job (all 256 CPUs). Energy is the measured energy of the whole node, including its idle power; cooling and network are excluded.

carbon calculation method

  • Time-matched: the run's energy 0.009983 kWh x the 15-minute carbon intensity of the grid (Electricity Maps, zone DE, lifecycle, flow-traced) in the quarter-hours the run used, weighted by the run's energy in each quarter-hour (split by power readings; 20:00 UTC 448 g/kWh x 100.0%) = 448.0 g/kWh, so 4.47 g CO2e. Window start and end are Europe/Berlin times. Recalculated on 2026-11-07: replaces the earlier value 4.68 g CO2e (469.0 g/kWh).

idle power method

  • Node hpc-cms01-024 does not save energy when nothing runs: its BIOS profile "HPC" (confirmed by the HPC@HU administrators) keeps the processor cores from sleeping. Node idle power: 427 W, the median IPMI power of the node in the cluster monitoring (Prometheus, a reading every 5 s) over the 30 days up to 2026-10-30, counting only times when nothing had run on the node for at least 30 minutes (load below 0.2, both GPUs below 60 W). Awake idle power: 448.2 W, the average IPMI power with the whole node allocated to an empty job while its power was read once a second on the node (Slurm job 1645539, 2026-10-25, 301 readings). It is almost the same (+21 W) because the cores do not sleep anyway. Energy above idle is the energy above the node idle power.

workflow stages of the run

git commit

  • 7c5cb9593b80d2a3cdc8bcb14137722351644435

job name

  • rangeland-test (Slurm job 1641623, partition standard, exit code 0:0)

container image

  • docker.io/davidfrantz/force:3.7.10;
  • quay.io/biocontainers/multiqc:1.25.1--pyhdfd78af_0;
  • quay.io/nf-core/ubuntu:22.04;

code version

  • 1.0.0

trace types

  • Slurm accounting (sacct); node CPU and IPMI power samples; node hardware inventory; node IPMI temperature readings; Nextflow log; Nextflow task trace

trace data format

  • TSV and plain text

CPUs used

  • All 256 CPUs (hardware threads) of the node: 128 cores on 2 processors.

fan speed average (rpm)

  • 7877.0

node CPU utilisation average (%)

  • 9.1

node conditions method

  • Node CPU utilisation: CPU time of all processes on the node (node_exporter, all modes except idle and iowait) / (256 CPUs x sampled time) = 9.1% (23.3 of 256 CPUs busy on average). Node power: IPMI power of the node (ipmi_exporter), 63 readings about every 1.0 s: average 562 W (over time), lowest 442 W, highest 801 W. CPU efficiency: job CPU time 1404 s / (256 allocated CPUs x 64 s) = 8.6%. Energy above idle = (node energy 35939 J - 427 W x 64 s) = 8611 J = 0.002392 kWh: the part of the energy that the job caused on top of what the node draws when it does nothing (idle power: see idle power method). CPU frequency: current frequency of the 256 CPUs the job could use (/proc/cpuinfo), 63 readings. At each reading the fastest of these CPUs is taken, because the CPUs that are working run fastest: average 3099 MHz, highest 3427 MHz. Average over all of these CPUs, including idle ones: 2412 MHz. Fan speed: IPMI fan sensors of the node (ipmi_exporter), 6 fans, 63 readings: average 7877 rpm (mean of the fans, over time), highest 8160 rpm. Data read and written: Slurm accounting MaxDiskRead and MaxDiskWrite of the job's 1 step(s): 18.073 GB read, 21.333 GB written. This is all data the job's processes read and wrote, on any file system.

workflow engine

language

  • C/C++  Language
  • R  Language

execution host

  • hpc-cms01-024

node allocatable CPU

  • 256

node allocatable memory (GB)

  • 1081.494192128

node architecture

  • x86_64; 2 x AMD EPYC 7713 64-Core Processor; 256 hardware threads

os image

  • openSUSE Leap 16.0

kernel version

  • 6.12.0-160000.36-default

backend